Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain OM08-13BH
Accession NumberQSTG00000000.1
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Phage terminase large subunit | DXC16_00585 | Not Available | - | 114579 - 115847 | 48249.1 |
| Transposase/terminase small subunit | DXC16_00590 | Not Available | - | 115844 - 116359 | 19402.8 |
| hypothetical protein | DXC16_00595 | Not Available | - | 116509 - 116694 | 7038.37 |
| Parb-like nuclease | DXC16_00600 | Not Available | - | 116762 - 117502 | 28155.3 |
| Adenine nucleotide alpha hydrolase-like protein | DXC16_00605 | Not Available | - | 117712 - 118386 | 26549.7 |
| Hypothetical protein | DXC16_00610 | Not Available | - | 118590 - 118979 | 14713.7 |
| Trna,type:pseudo,anti_codon:gac; | Not Available | Not Available | + | 119010 - 119084 | Not Available |
| duf3873 domain-containing protein | DXC16_00615 | Not Available | - | 119156 - 119362 | 8022.45 |
| hypothetical protein | DXC16_00620 | Not Available | - | 119502 - 119702 | 7441.17 |
| hypothetical protein | DXC16_00625 | Not Available | - | 119949 - 120128 | 6948.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
