Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1851 domain-containing protein | DXC16_25205 | Not Available | Positive | 5626748 - 5627338 | 22609.9 |
| hypothetical protein | DXC16_25210 | Not Available | Positive | 5627420 - 5627752 | 12913.3 |
| hypothetical protein | DXC16_25215 | Not Available | Positive | 5627832 - 5628224 | 15907.3 |
| is1182 family transposase | DXC16_25220 | Not Available | Positive | 5628529 - 5630040 | 59191.7 |
| undecaprenyl-phosphate glucose phosphotransferase | DXC16_25230 | Not Available | Negative | 5631843 - 5633108 | 49069.3 |
| dde transposase | DXC16_25235 | Not Available | Negative | 5633141 - 5634061 | 35878.5 |
| hypothetical protein | DXC16_25240 | Not Available | Negative | 5634120 - 5634461 | 13614.4 |
| upxy family transcription antiterminator | DXC16_25245 | Not Available | Negative | 5634995 - 5635513 | 20301.0 |
| rhs repeat protein | DXC16_25250 | Not Available | Negative | 5635917 - 5637287 | 52957.3 |
| hypothetical protein | DXC16_25265 | Not Available | Negative | 5639931 - 5640491 | 21215.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

