Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_25130 | Not Available | Negative | 5615944 - 5616453 | 19798.7 |
| hypothetical protein | DXC16_25135 | Not Available | Negative | 5617055 - 5617363 | 12084.6 |
| hypothetical protein | DXC16_25145 | Not Available | Positive | 5618059 - 5618502 | 17109.1 |
| hypothetical protein | DXC16_25155 | Not Available | Positive | 5619278 - 5619499 | 8439.16 |
| hypothetical protein | DXC16_25175 | Not Available | Negative | 5620326 - 5620661 | 13167.5 |
| is4 family transposase | DXC16_25180 | Not Available | Negative | 5620995 - 5622479 | 57143.8 |
| isas1 family transposase | DXC16_25185 | Not Available | Negative | 5622690 - 5622833 | 5426.91 |
| fic family protein | DXC16_25190 | Not Available | Negative | 5622878 - 5623723 | 32992.6 |
| fimbrillin family protein | DXC16_25195 | Not Available | Negative | 5624330 - 5624773 | 17249.3 |
| tyrosine protein kinase | DXC16_25200 | Not Available | Negative | 5624774 - 5626662 | 70040.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

