Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_25075 | Not Available | Negative | 5604003 - 5604326 | 12382.6 |
| hypothetical protein | DXC16_25080 | Not Available | Positive | 5604494 - 5604895 | 15348.5 |
| transposase | DXC16_25085 | Not Available | Positive | 5604883 - 5605275 | 15203.7 |
| is66 family transposase | DXC16_25090 | Not Available | Positive | 5605328 - 5606869 | 59971.9 |
| site-specific integrase | DXC16_25095 | Not Available | Positive | 5607108 - 5608331 | 47294.9 |
| group ii intron reverse transcriptase/maturase | DXC16_25105 | Not Available | Negative | 5609481 - 5611133 | 64718.6 |
| glucose-1-phosphate cytidylyltransferase | DXC16_25110 | Not Available | Positive | 5611787 - 5612560 | 29550.4 |
| cdp-glucose 4,6-dehydratase | DXC16_25115 | Not Available | Positive | 5612580 - 5613680 | 41174.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DXC16_25120 | Not Available | Positive | 5613680 - 5614111 | 16064.2 |
| is66-like element isbvu4 family transposase | DXC16_25125 | Not Available | Negative | 5614262 - 5615875 | 61939.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

