Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DXC16_25020 | Not Available | Positive | 5596382 - 5597062 | 26305.5 |
| hypothetical protein | DXC16_25025 | Not Available | Positive | 5597397 - 5597846 | 17373.3 |
| hypothetical protein | DXC16_25030 | Not Available | Positive | 5597850 - 5598101 | 10165.5 |
| hypothetical protein | DXC16_25035 | Not Available | Positive | 5598106 - 5598864 | 29777.3 |
| hypothetical protein | DXC16_25040 | Not Available | Positive | 5599149 - 5599628 | 18282.5 |
| hypothetical protein | DXC16_25045 | Not Available | Positive | 5599685 - 5599948 | 10334.2 |
| sam-dependent dna methyltransferase | DXC16_25050 | Not Available | Positive | 5599964 - 5600689 | 27690.7 |
| hypothetical protein | DXC16_25055 | Not Available | Positive | 5600719 - 5601042 | 12496.2 |
| hypothetical protein | DXC16_25060 | Not Available | Positive | 5601042 - 5601395 | 13675.7 |
| transposase | DXC16_25070 | Not Available | Negative | 5603642 - 5604010 | 14435.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

