Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine protein kinase | DXC16_24940 | Not Available | Positive | 5578492 - 5580842 | 87618.1 |
| hypothetical protein | DXC16_24945 | Not Available | Negative | 5580843 - 5581277 | 17571.2 |
| duf1016 family protein | DXC16_24950 | Not Available | Negative | 5581290 - 5582576 | 48663.1 |
| site-specific integrase | DXC16_24955 | Not Available | Negative | 5582640 - 5583923 | 50283.2 |
| hypothetical protein | DXC16_24975 | Not Available | Negative | 5585909 - 5586190 | 10431.7 |
| duf4091 domain-containing protein | DXC16_24990 | Not Available | Positive | 5588798 - 5590546 | 66454.4 |
| tonb-dependent receptor | DXC16_24995 | Not Available | Negative | 5590834 - 5593608 | 103307.0 |
| mobilization protein | DXC16_25000 | Not Available | Negative | 5593617 - 5594720 | 42190.3 |
| hypothetical protein | DXC16_25005 | Not Available | Negative | 5594810 - 5595007 | 7345.07 |
| repa protein | DXC16_25015 | Not Available | Negative | 5595338 - 5595934 | 22934.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

