Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_24890 | Not Available | Positive | 5569324 - 5569552 | 8678.51 |
| hypothetical protein | DXC16_24895 | Not Available | Positive | 5569561 - 5569812 | 9670.05 |
| hypothetical protein | DXC16_24900 | Not Available | Positive | 5570262 - 5571719 | 54555.8 |
| hypothetical protein | DXC16_24905 | Not Available | Positive | 5571841 - 5573316 | 55372.9 |
| ferritin | DXC16_24910 | Not Available | Negative | 5573648 - 5574130 | 17891.2 |
| 30s ribosomal protein s16 | DXC16_24915 | Not Available | Positive | 5574338 - 5574889 | 19788.4 |
| rpn family recombination-promoting nuclease/putative transposase | DXC16_24920 | Not Available | Negative | 5574968 - 5575825 | 33123.6 |
| dna/rna non-specific endonuclease | DXC16_24925 | Not Available | Negative | 5576078 - 5577172 | 41284.9 |
| hypothetical protein | DXC16_24930 | Not Available | Positive | 5577194 - 5577628 | 16620.7 |
| polysaccharide export protein | DXC16_24935 | Not Available | Positive | 5577654 - 5578454 | 29352.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

