Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DXC16_24755 | Not Available | Negative | 5549150 - 5549992 | 31481.2 |
| site-specific integrase | DXC16_24770 | Not Available | Positive | 5552102 - 5553394 | 50662.0 |
| hypothetical protein | DXC16_24775 | Not Available | Positive | 5553397 - 5554458 | 41784.7 |
| duf3853 family protein | DXC16_24780 | Not Available | Positive | 5554680 - 5554988 | 11297.9 |
| dna primase | DXC16_24805 | Not Available | Positive | 5558964 - 5559875 | 34570.4 |
| mobilization protein | DXC16_24810 | Not Available | Positive | 5560324 - 5560788 | 17871.3 |
| hypothetical protein | DXC16_24815 | Not Available | Positive | 5561017 - 5561202 | 7199.46 |
| repb family plasmid replication initiator protein | DXC16_24820 | Not Available | Positive | 5561153 - 5562157 | 39192.6 |
| charged multivesicular body protein 2b-b | DXC16_24825 | Not Available | Negative | 5562195 - 5562425 | 8337.08 |
| hypothetical protein | DXC16_24830 | Not Available | Negative | 5562445 - 5562897 | 17541.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

