Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | DXC16_24690 | Not Available | Positive | 5538245 - 5539054 | 30787.2 |
| hypothetical protein | DXC16_24700 | Not Available | Negative | 5539457 - 5540173 | 27254.6 |
| marr family transcriptional regulator | DXC16_24705 | Not Available | Positive | 5540273 - 5540719 | 17085.9 |
| hypothetical protein | DXC16_24715 | Not Available | Negative | 5542248 - 5542436 | 6688.22 |
| radical sam protein | DXC16_24720 | Not Available | Negative | 5542969 - 5543745 | 29335.2 |
| helix-hairpin-helix domain-containing protein | DXC16_24725 | Not Available | Negative | 5543791 - 5545863 | 81258.1 |
| duf4294 domain-containing protein | DXC16_24730 | Not Available | Positive | 5545960 - 5546532 | 22062.0 |
| trmh family rna methyltransferase | DXC16_24735 | Not Available | Negative | 5546563 - 5547099 | 20012.2 |
| gntr family transcriptional regulator | DXC16_24745 | Not Available | Negative | 5547883 - 5548248 | 14354.3 |
| hypothetical protein | DXC16_24750 | Not Available | Negative | 5548245 - 5549135 | 33916.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

