Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DXC16_24635 | Not Available | Positive | 5525563 - 5526243 | 26222.5 |
| hypothetical protein | DXC16_24640 | Not Available | Positive | 5526528 - 5526872 | 13264.3 |
| hypothetical protein | DXC16_24645 | Not Available | Positive | 5526929 - 5528278 | 51786.8 |
| arac family transcriptional regulator | DXC16_24655 | Not Available | Positive | 5529305 - 5530150 | 32485.3 |
| ketopantoate reductase family protein | DXC16_24660 | Not Available | Positive | 5530147 - 5531121 | 35943.8 |
| tonb-dependent receptor | DXC16_24665 | Not Available | Positive | 5531267 - 5533984 | 99897.8 |
| duf5017 domain-containing protein | DXC16_24670 | Not Available | Positive | 5534008 - 5536443 | 88620.9 |
| hypothetical protein | DXC16_24675 | Not Available | Positive | 5536455 - 5536661 | 7576.14 |
| mannose-1-phosphate guanylyltransferase | DXC16_24680 | Not Available | Negative | 5536772 - 5537815 | 39523.2 |
| Trna-leu | Not Available | Not Available | Positive | 5538000 - 5538086 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

