Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upxy family transcription antiterminator | DXC16_24530 | Not Available | Negative | 5507900 - 5508550 | 24605.0 |
| site-specific integrase | DXC16_24535 | Not Available | Negative | 5508847 - 5509782 | 36310.9 |
| hth domain-containing protein | DXC16_24540 | Not Available | Positive | 5510262 - 5511839 | 59570.7 |
| hypothetical protein | DXC16_24545 | Not Available | Positive | 5511844 - 5512551 | 26736.8 |
| xre family transcriptional regulator | DXC16_24550 | Not Available | Positive | 5513123 - 5513332 | 7786.45 |
| dna cytosine methyltransferase | DXC16_24555 | Not Available | Positive | 5513340 - 5513918 | 22093.8 |
| xre family transcriptional regulator | DXC16_24565 | Not Available | Negative | 5515112 - 5515327 | 7991.84 |
| hypothetical protein | DXC16_24570 | Not Available | Negative | 5515308 - 5515604 | 11631.5 |
| hypothetical protein | DXC16_24575 | Not Available | Negative | 5515783 - 5516022 | 9221.45 |
| hypothetical protein | DXC16_24580 | Not Available | Negative | 5516025 - 5516231 | 7730.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

