Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_24365 | Not Available | Positive | 5473953 - 5474147 | 7349.1 |
| threonine/serine exporter family protein | DXC16_24370 | Not Available | Negative | 5474223 - 5475569 | 50176.2 |
| pasta domain-containing protein | DXC16_24375 | Not Available | Positive | 5475719 - 5476360 | 23471.9 |
| rlua family pseudouridine synthase | DXC16_24380 | Not Available | Positive | 5476379 - 5477452 | 40774.7 |
| d-alanine--d-alanine ligase | DXC16_24385 | Not Available | Positive | 5477449 - 5478423 | 36067.1 |
| acyltransferase | DXC16_24390 | Not Available | Positive | 5478452 - 5479609 | 44510.6 |
| hypothetical protein | DXC16_24395 | Not Available | Positive | 5479668 - 5480318 | 24878.8 |
| rhodanese-like domain-containing protein | DXC16_24400 | Not Available | Positive | 5480348 - 5480746 | 15066.1 |
| aaa family atpase | DXC16_24405 | Not Available | Negative | 5481254 - 5482447 | 45798.3 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXC16_24410 | Not Available | Negative | 5482772 - 5484631 | 70276.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

