Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1273 family protein | DXC16_24260 | Not Available | Negative | 5450264 - 5450878 | 23976.8 |
| phosphoribosyltransferase | DXC16_24265 | Not Available | Negative | 5450880 - 5451446 | 21879.6 |
| crispr-associated endonuclease cas2 | DXC16_24270 | Not Available | Negative | 5453669 - 5453959 | 11015.4 |
| type i-c crispr-associated endonuclease cas1 | DXC16_24275 | Not Available | Negative | 5453969 - 5454991 | 38708.3 |
| crispr-associated protein cas4 | DXC16_24280 | Not Available | Negative | 5454988 - 5455653 | 25837.0 |
| type i-c crispr-associated protein cas7/csd2 | DXC16_24285 | Not Available | Negative | 5455663 - 5456547 | 32507.9 |
| type i-c crispr-associated protein cas8c/csd1 | DXC16_24290 | Not Available | Negative | 5456567 - 5458282 | 65038.0 |
| type i-c crispr-associated protein cas5 | DXC16_24295 | Not Available | Negative | 5458279 - 5458959 | 26815.2 |
| hypothetical protein | DXC16_24300 | Not Available | Negative | 5458961 - 5459821 | 33244.5 |
| hypothetical protein | DXC16_24305 | Not Available | Negative | 5459882 - 5460108 | 8885.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

