Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | DXC16_24210 | Not Available | Negative | 5442981 - 5443379 | 14892.7 |
| hypothetical protein | DXC16_24215 | Not Available | Positive | 5443711 - 5443908 | 7484.93 |
| type ii toxin-antitoxin system hipa family toxin | DXC16_24220 | Not Available | Negative | 5444495 - 5445772 | 48373.7 |
| xre family transcriptional regulator | DXC16_24225 | Not Available | Negative | 5445769 - 5446107 | 12702.8 |
| single-stranded dna-binding protein | DXC16_24230 | Not Available | Negative | 5446277 - 5446392 | 4363.17 |
| single-stranded dna-binding protein | DXC16_24235 | Not Available | Negative | 5446403 - 5446668 | 10430.6 |
| hypothetical protein | DXC16_24240 | Not Available | Positive | 5447000 - 5447197 | 7425.87 |
| duf3990 domain-containing protein | DXC16_24245 | Not Available | Negative | 5447542 - 5448024 | 18460.3 |
| duf3791 domain-containing protein | DXC16_24250 | Not Available | Negative | 5448021 - 5448470 | 17822.5 |
| is4 family transposase | DXC16_24255 | Not Available | Positive | 5448907 - 5450070 | 45928.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

