Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_24160 | Not Available | Negative | 5429745 - 5430317 | 21569.6 |
| luxr family transcriptional regulator | DXC16_24165 | Not Available | Negative | 5430465 - 5431745 | 50080.3 |
| hypothetical protein | DXC16_24170 | Not Available | Negative | 5432123 - 5432644 | 19895.7 |
| hypothetical protein | DXC16_24175 | Not Available | Negative | 5432746 - 5432937 | 6982.41 |
| repb family plasmid replication initiator protein | DXC16_24180 | Not Available | Negative | 5432951 - 5433928 | 38642.7 |
| susc/raga family tonb-linked outer membrane protein | DXC16_24185 | Not Available | Positive | 5434111 - 5437527 | 125473.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXC16_24190 | Not Available | Positive | 5437546 - 5439159 | 60320.1 |
| dicarboxylate/amino acid:cation symporter | DXC16_24195 | Not Available | Positive | 5439395 - 5440576 | 42233.4 |
| hypothetical protein | DXC16_24200 | Not Available | Positive | 5440686 - 5442179 | 55995.6 |
| hypothetical protein | DXC16_24205 | Not Available | Positive | 5442191 - 5442751 | 21317.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

