Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | DXC16_24055 | Not Available | Negative | 5408787 - 5409848 | 39089.9 |
| 2-isopropylmalate synthase | DXC16_24060 | Not Available | Negative | 5409942 - 5411462 | 56824.1 |
| 3-isopropylmalate dehydratase small subunit | DXC16_24065 | Not Available | Negative | 5411468 - 5412064 | 22479.6 |
| 3-isopropylmalate dehydratase large subunit | DXC16_24070 | Not Available | Negative | 5412078 - 5413460 | 50049.1 |
| 2-isopropylmalate synthase | DXC16_24075 | Not Available | Negative | 5413478 - 5414974 | 54450.0 |
| hypothetical protein | DXC16_24080 | Not Available | Positive | 5415503 - 5415883 | 14717.3 |
| dde transposase | DXC16_24085 | Not Available | Positive | 5415849 - 5416832 | 37569.8 |
| Trna-asn | Not Available | Not Available | Positive | 5416988 - 5417061 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 5417247 - 5417320 | Not Available |
| adenosine kinase | DXC16_24100 | Not Available | Positive | 5417401 - 5418387 | 35280.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

