Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_24005 | Not Available | Negative | 5395926 - 5396135 | 7950.48 |
| ktsc domain-containing protein | DXC16_24010 | Not Available | Negative | 5396508 - 5396693 | 7288.58 |
| diacylglucosamine hydrolase | DXC16_24015 | Not Available | Positive | 5397109 - 5397699 | 22791.2 |
| arac family transcriptional regulator | DXC16_24020 | Not Available | Positive | 5397696 - 5399513 | 70592.4 |
| susc/raga family tonb-linked outer membrane protein | DXC16_24025 | Not Available | Positive | 5399706 - 5402957 | 121772.0 |
| starch-binding protein | DXC16_24030 | Not Available | Positive | 5402969 - 5404390 | 53335.2 |
| ahpc/tsa family protein | DXC16_24035 | Not Available | Positive | 5404409 - 5405590 | 43766.7 |
| tetratricopeptide repeat protein | DXC16_24040 | Not Available | Negative | 5405984 - 5406838 | 32554.4 |
| peptide-methionine (s)-s-oxide reductase | DXC16_24045 | Not Available | Positive | 5406956 - 5407441 | 18625.0 |
| ahpc/tsa family protein | DXC16_24050 | Not Available | Negative | 5407510 - 5408655 | 42890.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

