Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DXC16_23905 | Not Available | Negative | 5373803 - 5374324 | 20094.9 |
| gnat family n-acetyltransferase | DXC16_23910 | Not Available | Negative | 5374342 - 5374773 | 16235.8 |
| n-acetyltransferase | DXC16_23915 | Not Available | Positive | 5374878 - 5375363 | 18784.7 |
| duf488 family protein | DXC16_23920 | Not Available | Positive | 5375437 - 5375793 | 14248.8 |
| acetyl-coa carboxylase biotin carboxylase subunit | DXC16_23925 | Not Available | Positive | 5375970 - 5376250 | 10459.6 |
| Trna-phe | Not Available | Not Available | Positive | 5376419 - 5376491 | Not Available |
| thiamine-phosphate kinase | DXC16_23935 | Not Available | Negative | 5376609 - 5377649 | 38257.9 |
| purine-nucleoside phosphorylase | DXC16_23940 | Not Available | Negative | 5377654 - 5378463 | 29940.3 |
| tetraacyldisaccharide 4'-kinase | DXC16_23945 | Not Available | Negative | 5378426 - 5379526 | 42222.5 |
| signal peptide peptidase sppa | DXC16_23950 | Not Available | Negative | 5379534 - 5381315 | 65863.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

