Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DXC16_23850 | Not Available | Positive | 5362801 - 5363439 | 24089.6 |
| glpgli family protein | DXC16_23855 | Not Available | Positive | 5363518 - 5365224 | 63526.1 |
| integrase | DXC16_23865 | Not Available | Negative | 5365888 - 5366490 | 22624.3 |
| cell filamentation protein fic | DXC16_23870 | Not Available | Positive | 5366459 - 5366929 | 18125.9 |
| duf3784 domain-containing protein | DXC16_23875 | Not Available | Positive | 5366941 - 5367258 | 11649.9 |
| hypothetical protein | DXC16_23880 | Not Available | Positive | 5367563 - 5367901 | 12594.3 |
| tonb-dependent receptor | DXC16_23885 | Not Available | Positive | 5367926 - 5370232 | 86186.5 |
| hypothetical protein | DXC16_23890 | Not Available | Positive | 5370236 - 5370586 | 13439.4 |
| luxr family transcriptional regulator | DXC16_23895 | Not Available | Negative | 5370527 - 5371291 | 29423.2 |
| duf4080 domain-containing protein | DXC16_23900 | Not Available | Negative | 5372150 - 5373787 | 62682.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

