Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fluoride efflux transporter crcb | DXC16_23800 | Not Available | Positive | 5345970 - 5346335 | 13272.6 |
| hypothetical protein | DXC16_23805 | Not Available | Negative | 5346409 - 5347164 | 28172.2 |
| hybrid sensor histidine kinase/response regulator | DXC16_23810 | Not Available | Positive | 5347461 - 5351450 | 152171.0 |
| pap2 family protein | DXC16_23815 | Not Available | Positive | 5351557 - 5352174 | 23072.8 |
| 9-o-acetylesterase | DXC16_23820 | Not Available | Positive | 5352212 - 5354128 | 72565.5 |
| type ii pantothenate kinase | DXC16_23825 | Not Available | Positive | 5354206 - 5355030 | 29299.7 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXC16_23830 | Not Available | Negative | 5355561 - 5357447 | 72167.2 |
| susc/raga family tonb-linked outer membrane protein | DXC16_23835 | Not Available | Negative | 5357475 - 5360753 | 120429.0 |
| virulence-associated protein e | DXC16_23840 | Not Available | Negative | 5361336 - 5362487 | 45212.5 |
| hypothetical protein | DXC16_23845 | Not Available | Negative | 5362593 - 5362799 | 7958.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

