Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination factor nusb | DXC16_23700 | Not Available | Negative | 5321182 - 5322108 | 36291.4 |
| duf3276 family protein | DXC16_23705 | Not Available | Positive | 5322304 - 5322687 | 14786.4 |
| 50s ribosomal protein l25 | DXC16_23710 | Not Available | Positive | 5322867 - 5323463 | 21429.4 |
| aminoacyl-trna hydrolase | DXC16_23715 | Not Available | Positive | 5323488 - 5324051 | 20618.0 |
| rna-binding s4 domain-containing protein | DXC16_23720 | Not Available | Positive | 5324051 - 5324479 | 16437.7 |
| hit family protein | DXC16_23725 | Not Available | Negative | 5324570 - 5324995 | 16329.5 |
| sodium:proton antiporter | DXC16_23730 | Not Available | Negative | 5325020 - 5327287 | 84385.5 |
| glycine cleavage system aminomethyltransferase gcvt | DXC16_23735 | Not Available | Negative | 5327493 - 5328578 | 39655.6 |
| peptidase t | DXC16_23740 | Not Available | Negative | 5328614 - 5329834 | 45345.2 |
| amidophosphoribosyltransferase | DXC16_23745 | Not Available | Negative | 5329942 - 5331348 | 51992.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

