Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DXC16_23645 | Not Available | Positive | 5304622 - 5304918 | 11493.2 |
| hypothetical protein | DXC16_23650 | Not Available | Negative | 5305708 - 5307864 | 82307.2 |
| helicase | DXC16_23655 | Not Available | Negative | 5307869 - 5311951 | 157468.0 |
| hypothetical protein | DXC16_23660 | Not Available | Negative | 5311938 - 5314364 | 96270.4 |
| duf2075 domain-containing protein | DXC16_23665 | Not Available | Negative | 5314366 - 5316117 | 67134.7 |
| hypothetical protein | DXC16_23670 | Not Available | Negative | 5316144 - 5317547 | 56390.0 |
| hypothetical protein | DXC16_23680 | Not Available | Negative | 5318688 - 5319128 | 16021.2 |
| dephospho-coa kinase | DXC16_23685 | Not Available | Negative | 5319195 - 5319791 | 22356.1 |
| ybbr-like domain-containing protein | DXC16_23690 | Not Available | Negative | 5319784 - 5320797 | 39038.4 |
| preprotein translocase subunit yajc | DXC16_23695 | Not Available | Negative | 5320811 - 5321125 | 11609.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

