Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXC16_23585 | Not Available | Positive | 5290293 - 5291757 | 55061.3 |
| duf2149 domain-containing protein | DXC16_23590 | Not Available | Negative | 5291977 - 5292306 | 12343.8 |
| mota/tolq/exbb proton channel family protein | DXC16_23595 | Not Available | Negative | 5292315 - 5292920 | 22225.7 |
| hypothetical protein | DXC16_23600 | Not Available | Negative | 5292970 - 5293659 | 25098.2 |
| cobaltochelatase subunit cobn | DXC16_23605 | Not Available | Negative | 5293670 - 5297857 | 154192.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_23615 | Not Available | Positive | 5299208 - 5299318 | 4096.78 |
| hypothetical protein | DXC16_23620 | Not Available | Positive | 5299572 - 5299913 | 12441.4 |
| tonb-dependent receptor | DXC16_23625 | Not Available | Positive | 5300218 - 5302536 | 86426.7 |
| duf4372 domain-containing protein | DXC16_23635 | Not Available | Negative | 5303455 - 5303703 | 9719.85 |
| dna-binding protein | DXC16_23640 | Not Available | Positive | 5304330 - 5304644 | 12330.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

