Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_23415 | Not Available | Positive | 5248914 - 5249234 | 11721.3 |
| hypothetical protein | DXC16_23430 | Not Available | Positive | 5251096 - 5251419 | 12474.5 |
| hypothetical protein | DXC16_23435 | Not Available | Positive | 5251443 - 5252249 | 31021.1 |
| hypothetical protein | DXC16_23440 | Not Available | Positive | 5252268 - 5252900 | 23737.4 |
| hypothetical protein | DXC16_23445 | Not Available | Negative | 5253073 - 5253531 | 17452.0 |
| hypothetical protein | DXC16_23450 | Not Available | Negative | 5253542 - 5254330 | 29506.6 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 5254604 - 5254999 | Not Available |
| Tmrna,resume consensus sequence (at 393): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 5254784 - 5255303 | Not Available |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 5255212 - 5255606 | Not Available |
| lactonase family protein | DXC16_23465 | Not Available | Positive | 5255747 - 5256913 | 42728.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

