Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | DXC16_23300 | Not Available | Negative | 5222424 - 5226410 | 150567.0 |
| hypothetical protein | DXC16_23305 | Not Available | Negative | 5226551 - 5229907 | 126618.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_23310 | Not Available | Negative | 5230047 - 5231666 | 61287.8 |
| susc/raga family tonb-linked outer membrane protein | DXC16_23315 | Not Available | Negative | 5231693 - 5234413 | 102434.0 |
| fimbrillin family protein | DXC16_23320 | Not Available | Negative | 5234414 - 5235495 | 40820.1 |
| hypothetical protein | DXC16_23330 | Not Available | Negative | 5235952 - 5236185 | 8726.58 |
| para family protein | DXC16_23335 | Not Available | Negative | 5236201 - 5236980 | 28471.4 |
| hypothetical protein | DXC16_23340 | Not Available | Negative | 5237184 - 5237453 | 9733.04 |
| hypothetical protein | DXC16_23345 | Not Available | Positive | 5237879 - 5238076 | 7582.07 |
| duf1738 domain-containing protein | DXC16_23350 | Not Available | Positive | 5238073 - 5239692 | 61110.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

