Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_23250 | Not Available | Negative | 5209885 - 5210271 | 14710.8 |
| hypothetical protein | DXC16_23255 | Not Available | Negative | 5210268 - 5210576 | 11461.0 |
| hypothetical protein | DXC16_23260 | Not Available | Positive | 5211147 - 5211359 | 8204.06 |
| transposase | DXC16_23265 | Not Available | Negative | 5211433 - 5212929 | 58037.7 |
| pyruvate, phosphate dikinase | DXC16_23270 | Not Available | Negative | 5213143 - 5215863 | 99866.6 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DXC16_23275 | Not Available | Positive | 5216062 - 5217483 | 54000.1 |
| rlua family pseudouridine synthase | DXC16_23280 | Not Available | Positive | 5217528 - 5218454 | 35718.2 |
| stas domain-containing protein | DXC16_23285 | Not Available | Negative | 5219521 - 5221203 | 60574.7 |
| duf4884 domain-containing protein | DXC16_23290 | Not Available | Negative | 5221302 - 5221571 | 10192.1 |
| rubrerythrin family protein | DXC16_23295 | Not Available | Positive | 5221752 - 5222330 | 21639.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

