Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_23195 | Not Available | Positive | 5199038 - 5199268 | 9343.46 |
| crp/fnr family transcriptional regulator | DXC16_23200 | Not Available | Positive | 5199278 - 5199904 | 24753.1 |
| hypothetical protein | DXC16_23205 | Not Available | Positive | 5200060 - 5200470 | 15585.5 |
| hypothetical protein | DXC16_23210 | Not Available | Positive | 5200505 - 5200705 | 7437.23 |
| hypothetical protein | DXC16_23215 | Not Available | Negative | 5200743 - 5200940 | 7526.21 |
| hypothetical protein | DXC16_23220 | Not Available | Positive | 5201417 - 5202118 | 26763.7 |
| nucleotidyl transferase abieii/abigii toxin family protein | DXC16_23225 | Not Available | Positive | 5202128 - 5203144 | 38681.9 |
| conjugal transfer protein trag | DXC16_23230 | Not Available | Negative | 5203188 - 5204320 | 42765.0 |
| atp-dependent helicase | DXC16_23240 | Not Available | Positive | 5206016 - 5207791 | 68455.1 |
| mobilization protein | DXC16_23245 | Not Available | Negative | 5208202 - 5209767 | 60757.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

