Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 92 protein | DXC16_23025 | Not Available | Negative | 5165924 - 5168116 | 82062.1 |
| cof-type had-iib family hydrolase | DXC16_23030 | Not Available | Negative | 5168320 - 5169102 | 28795.5 |
| glutamate 5-kinase | DXC16_23035 | Not Available | Positive | 5169261 - 5170343 | 39536.0 |
| gamma-glutamyl-phosphate reductase | DXC16_23040 | Not Available | Positive | 5170381 - 5171634 | 45494.7 |
| acetylornithine carbamoyltransferase | DXC16_23045 | Not Available | Positive | 5171654 - 5172619 | 36461.8 |
| duf2075 domain-containing protein | DXC16_23050 | Not Available | Negative | 5172784 - 5173296 | 20088.1 |
| hypothetical protein | DXC16_23055 | Not Available | Positive | 5173513 - 5173794 | 10829.8 |
| hypothetical protein | DXC16_23060 | Not Available | Positive | 5173904 - 5174164 | 9603.67 |
| rpn family recombination-promoting nuclease/putative transposase | DXC16_23070 | Not Available | Negative | 5175108 - 5176058 | 36533.3 |
| glycosyltransferase family 1 protein | DXC16_23080 | Not Available | Negative | 5177037 - 5178167 | 44133.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

