Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | DXC16_22975 | Not Available | Positive | 5149877 - 5151199 | 48754.5 |
| signal recognition particle protein | DXC16_22980 | Not Available | Positive | 5151298 - 5152620 | 48854.7 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DXC16_22985 | Not Available | Positive | 5152734 - 5153615 | 31535.7 |
| capa family protein | DXC16_22990 | Not Available | Positive | 5154551 - 5155624 | 40883.5 |
| Trna-his | Not Available | Not Available | Positive | 5155700 - 5155776 | Not Available |
| susc/raga family tonb-linked outer membrane protein | DXC16_23000 | Not Available | Positive | 5156008 - 5159103 | 113963.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXC16_23005 | Not Available | Positive | 5159125 - 5161065 | 72026.3 |
| hypothetical protein | DXC16_23010 | Not Available | Positive | 5161333 - 5161833 | 19223.5 |
| alpha-l-fucosidase | DXC16_23015 | Not Available | Positive | 5162047 - 5163438 | 53594.9 |
| beta-glucosidase | DXC16_23020 | Not Available | Positive | 5163492 - 5165801 | 83744.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

