Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent class ii aminotransferase | DXC16_22775 | Not Available | Positive | 5098117 - 5099127 | 38747.6 |
| cobalamin biosynthesis protein cobd | DXC16_22780 | Not Available | Positive | 5099109 - 5100041 | 34501.9 |
| Trna-gly | Not Available | Not Available | Positive | 5100077 - 5100152 | Not Available |
| hypothetical protein | DXC16_22790 | Not Available | Negative | 5100770 - 5102023 | 48858.8 |
| hypothetical protein | DXC16_22795 | Not Available | Negative | 5102151 - 5102375 | 8780.61 |
| aaa family atpase | DXC16_22800 | Not Available | Negative | 5103385 - 5104965 | 61192.9 |
| ribosome-recycling factor | DXC16_22805 | Not Available | Positive | 5105204 - 5105764 | 20738.2 |
| ribosome small subunit-dependent gtpase a | DXC16_22810 | Not Available | Positive | 5105885 - 5106817 | 35068.7 |
| m20/m25/m40 family metallo-hydrolase | DXC16_22815 | Not Available | Positive | 5106831 - 5107850 | 38280.7 |
| efflux rnd transporter periplasmic adaptor subunit | DXC16_22820 | Not Available | Positive | 5107937 - 5109013 | 39686.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

