Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_22725 | Not Available | Negative | 5083021 - 5083272 | 9673.73 |
| anaerobic ribonucleoside-triphosphate reductase | DXC16_22730 | Not Available | Positive | 5083984 - 5086077 | 80525.2 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | DXC16_22735 | Not Available | Positive | 5086061 - 5086528 | 17754.3 |
| heme-binding protein | DXC16_22740 | Not Available | Negative | 5086578 - 5087774 | 45154.6 |
| tonb-dependent receptor | DXC16_22745 | Not Available | Negative | 5087808 - 5089868 | 78267.4 |
| tonb-dependent receptor | DXC16_22750 | Not Available | Negative | 5090240 - 5092417 | 81363.8 |
| putative transporter | DXC16_22755 | Not Available | Negative | 5092810 - 5094498 | 60780.7 |
| cobyrinate a,c-diamide synthase | DXC16_22760 | Not Available | Positive | 5094734 - 5096062 | 49093.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DXC16_22765 | Not Available | Positive | 5096059 - 5096634 | 22231.8 |
| cobyric acid synthase | DXC16_22770 | Not Available | Positive | 5096634 - 5098124 | 55380.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

