Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_22675 | Not Available | Positive | 5069747 - 5070187 | 16654.3 |
| l-serine ammonia-lyase | DXC16_22680 | Not Available | Negative | 5070366 - 5071574 | 43967.2 |
| metallophosphatase | DXC16_22685 | Not Available | Negative | 5071724 - 5072887 | 44465.8 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_22690 | Not Available | Negative | 5072908 - 5074356 | 54497.3 |
| susc/raga family tonb-linked outer membrane protein | DXC16_22695 | Not Available | Negative | 5074376 - 5077729 | 125102.0 |
| fecr family protein | DXC16_22700 | Not Available | Negative | 5077745 - 5078914 | 44529.6 |
| rna polymerase sigma-70 factor | DXC16_22705 | Not Available | Negative | 5079018 - 5079569 | 21576.8 |
| endonuclease muts2 | DXC16_22710 | Not Available | Negative | 5079649 - 5082153 | 95122.6 |
| Trna-ser | Not Available | Not Available | Positive | 5082300 - 5082387 | Not Available |
| acetyl-coa carboxylase biotin carboxylase subunit | DXC16_22720 | Not Available | Negative | 5082775 - 5083055 | 10611.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

