Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine phosphoribosyltransferase | DXC16_22625 | Not Available | Negative | 5060132 - 5060698 | 20888.7 |
| hypothetical protein | DXC16_22630 | Not Available | Positive | 5061055 - 5061378 | 11757.4 |
| ytxh domain-containing protein | DXC16_22635 | Not Available | Positive | 5061584 - 5061832 | 9341.14 |
| Trna-glu | Not Available | Not Available | Positive | 5062093 - 5062167 | Not Available |
| hypothetical protein | DXC16_22645 | Not Available | Positive | 5062310 - 5063599 | 48095.4 |
| deoxyribonuclease iv | DXC16_22650 | Not Available | Positive | 5063642 - 5064478 | 31427.5 |
| trpb-like pyridoxal phosphate-dependent enzyme | DXC16_22655 | Not Available | Negative | 5064794 - 5066158 | 50260.2 |
| potassium transporter | DXC16_22660 | Not Available | Positive | 5066334 - 5068181 | 68663.9 |
| trka family potassium uptake protein | DXC16_22665 | Not Available | Positive | 5068184 - 5068870 | 25663.1 |
| duf4738 domain-containing protein | DXC16_22670 | Not Available | Positive | 5069085 - 5069654 | 21225.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

