Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DXC16_22575 | Not Available | Negative | 5048032 - 5049171 | 42158.0 |
| duf5119 domain-containing protein | DXC16_22580 | Not Available | Negative | 5049215 - 5050222 | 37858.5 |
| hypothetical protein | DXC16_22585 | Not Available | Negative | 5050219 - 5050557 | 13051.2 |
| recombinase | DXC16_22590 | Not Available | Negative | 5050950 - 5052038 | 41882.2 |
| duf1282 domain-containing protein | DXC16_22595 | Not Available | Positive | 5052413 - 5052982 | 21095.3 |
| ssra-binding protein | DXC16_22600 | Not Available | Positive | 5052982 - 5053434 | 17545.4 |
| methionine synthase | DXC16_22605 | Not Available | Positive | 5053472 - 5056225 | 100894.0 |
| nucleotidyltransferase family protein | DXC16_22610 | Not Available | Negative | 5056421 - 5057266 | 32119.8 |
| phosphotransferase | DXC16_22615 | Not Available | Negative | 5057263 - 5058693 | 55485.1 |
| purine permease | DXC16_22620 | Not Available | Negative | 5058796 - 5060127 | 46598.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

