Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylanase | DXC16_22525 | Not Available | Positive | 5034859 - 5036244 | 51125.5 |
| hybrid sensor histidine kinase/response regulator | DXC16_22530 | Not Available | Positive | 5036380 - 5040312 | 149365.0 |
| rna-binding protein | DXC16_22535 | Not Available | Positive | 5040578 - 5040823 | 9144.0 |
| sodium:glutamate symporter | DXC16_22540 | Not Available | Negative | 5041047 - 5042426 | 49927.3 |
| hypothetical protein | DXC16_22545 | Not Available | Negative | 5042641 - 5043255 | 23056.4 |
| hypothetical protein | DXC16_22550 | Not Available | Positive | 5043603 - 5044358 | 27755.0 |
| hypothetical protein | DXC16_22555 | Not Available | Negative | 5044509 - 5044688 | 6795.28 |
| hypothetical protein | DXC16_22560 | Not Available | Negative | 5044633 - 5044755 | 4290.01 |
| hypothetical protein | DXC16_22565 | Not Available | Negative | 5045060 - 5046766 | 63731.6 |
| fimbrillin family protein | DXC16_22570 | Not Available | Negative | 5046832 - 5047902 | 39488.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

