Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter periplasmic protein lptc | DXC16_22415 | Not Available | Negative | 5002551 - 5003195 | 24876.2 |
| tetratricopeptide repeat protein | DXC16_22420 | Not Available | Negative | 5003198 - 5004553 | 50268.8 |
| hypothetical protein | DXC16_22425 | Not Available | Negative | 5004600 - 5005916 | 49216.0 |
| type iii pantothenate kinase | DXC16_22430 | Not Available | Negative | 5005903 - 5006631 | 26911.9 |
| duf4105 domain-containing protein | DXC16_22435 | Not Available | Positive | 5006758 - 5007933 | 45049.3 |
| alkaline phosphatase family protein | DXC16_22440 | Not Available | Positive | 5007930 - 5009513 | 59448.7 |
| preprotein translocase subunit seca | DXC16_22445 | Not Available | Positive | 5009609 - 5012905 | 125101.0 |
| hypothetical protein | DXC16_22450 | Not Available | Positive | 5013028 - 5014020 | 37676.2 |
| hypothetical protein | DXC16_22455 | Not Available | Positive | 5014091 - 5014540 | 17049.0 |
| hypothetical protein | DXC16_22460 | Not Available | Negative | 5014615 - 5014992 | 14902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

