Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_22365 | Not Available | Negative | 4979058 - 4981289 | 85680.7 |
| sialate o-acetylesterase | DXC16_22370 | Not Available | Negative | 4981302 - 4982726 | 53405.0 |
| dna-binding protein | DXC16_22375 | Not Available | Negative | 4982744 - 4985974 | 121426.0 |
| glycoside hydrolase family 2 | DXC16_22380 | Not Available | Negative | 4986122 - 4988962 | 106090.0 |
| duf4981 domain-containing protein | DXC16_22385 | Not Available | Negative | 4989053 - 4992265 | 122909.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_22390 | Not Available | Negative | 4992395 - 4993894 | 55427.2 |
| tonb-dependent receptor | DXC16_22395 | Not Available | Negative | 4993920 - 4996994 | 113204.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_22400 | Not Available | Negative | 4997206 - 4998663 | 55003.7 |
| peptidylprolyl isomerase | DXC16_22405 | Not Available | Negative | 4999040 - 5001172 | 78893.4 |
| hlyc/corc family transporter | DXC16_22410 | Not Available | Negative | 5001278 - 5002537 | 47647.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

