Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | DXC16_22315 | Not Available | Negative | 4969438 - 4969830 | 15184.8 |
| uroporphyrinogen-iii synthase | DXC16_22320 | Not Available | Negative | 4969933 - 4970682 | 28619.6 |
| duf4271 domain-containing protein | DXC16_22325 | Not Available | Negative | 4970687 - 4971499 | 31538.0 |
| tigr00730 family rossman fold protein | DXC16_22330 | Not Available | Negative | 4971496 - 4972083 | 21517.4 |
| methionine adenosyltransferase | DXC16_22335 | Not Available | Negative | 4972198 - 4973490 | 47597.8 |
| dha2 family efflux mfs transporter permease subunit | DXC16_22340 | Not Available | Positive | 4973768 - 4975144 | 49030.7 |
| metallophosphoesterase | DXC16_22345 | Not Available | Positive | 4975198 - 4976028 | 31445.9 |
| acyltransferase | DXC16_22350 | Not Available | Positive | 4976043 - 4977185 | 43799.9 |
| Trna-lys | Not Available | Not Available | Positive | 4977518 - 4977593 | Not Available |
| linear amide c-n hydrolase | DXC16_22360 | Not Available | Negative | 4977765 - 4978844 | 39634.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

