Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_22260 | Not Available | Negative | 4955718 - 4957385 | 64185.7 |
| port family protein | DXC16_22265 | Not Available | Negative | 4957428 - 4958015 | 21953.3 |
| glycoside hydrolase | DXC16_22275 | Not Available | Negative | 4958223 - 4960202 | 75348.0 |
| dna mismatch repair protein muts | DXC16_22280 | Not Available | Negative | 4960252 - 4962864 | 97854.5 |
| flavin reductase family protein | DXC16_22285 | Not Available | Positive | 4962983 - 4963489 | 19380.2 |
| Trna-gln | Not Available | Not Available | Positive | 4963620 - 4963690 | Not Available |
| peptidase s41 | DXC16_22295 | Not Available | Positive | 4963825 - 4967079 | 121882.0 |
| tyrosine--trna ligase | DXC16_22300 | Not Available | Negative | 4967204 - 4968496 | 48043.5 |
| hydrolase tatd | DXC16_22305 | Not Available | Negative | 4968576 - 4969205 | 24010.2 |
| membrane protein insertion efficiency factor yidd | DXC16_22310 | Not Available | Negative | 4969220 - 4969441 | 8364.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

