Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | DXC16_22150 | Not Available | Negative | 4932215 - 4933591 | 51854.2 |
| hded family acid-resistance protein | DXC16_22160 | Not Available | Positive | 4935360 - 4935923 | 20986.6 |
| translocation/assembly module tamb | DXC16_22165 | Not Available | Positive | 4935988 - 4940448 | 166440.0 |
| agmatine deiminase family protein | DXC16_22170 | Not Available | Positive | 4940503 - 4941528 | 39316.7 |
| acyltransferase | DXC16_22175 | Not Available | Positive | 4941540 - 4942427 | 33260.4 |
| duf4251 domain-containing protein | DXC16_22180 | Not Available | Positive | 4942542 - 4943132 | 21487.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DXC16_22185 | Not Available | Negative | 4943226 - 4943753 | 19617.8 |
| aspartate--trna(asp/asn) ligase | DXC16_22190 | Not Available | Negative | 4943928 - 4945691 | 66472.9 |
| thioredoxin | DXC16_22195 | Not Available | Negative | 4945820 - 4946116 | 11390.7 |
| duf2023 family protein | DXC16_22200 | Not Available | Negative | 4946449 - 4946793 | 13416.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

