Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DXC16_22095 | Not Available | Negative | 4925212 - 4925706 | 19138.0 |
| hsp20/alpha crystallin family protein | DXC16_22100 | Not Available | Negative | 4925753 - 4926181 | 16368.5 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | DXC16_22105 | Not Available | Negative | 4926249 - 4926998 | 28491.2 |
| class i fructose-bisphosphate aldolase | DXC16_22110 | Not Available | Negative | 4927012 - 4928061 | 38083.6 |
| ferritin | DXC16_22115 | Not Available | Negative | 4928090 - 4928572 | 18303.6 |
| marc family protein | DXC16_22120 | Not Available | Negative | 4928623 - 4929348 | 27114.4 |
| hypothetical protein | DXC16_22130 | Not Available | Negative | 4929987 - 4930196 | 8005.49 |
| hypothetical protein | DXC16_22135 | Not Available | Negative | 4930187 - 4930372 | 7038.73 |
| hypothetical protein | DXC16_22140 | Not Available | Positive | 4930374 - 4930595 | 8694.83 |
| transcriptional regulator | DXC16_22145 | Not Available | Negative | 4930917 - 4931717 | 30523.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

