Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXC16_22040 | Not Available | Negative | 4909759 - 4911066 | 49282.1 |
| tonb-dependent receptor | DXC16_22045 | Not Available | Negative | 4911096 - 4914203 | 114493.0 |
| histidinol-phosphatase | DXC16_22050 | Not Available | Positive | 4914780 - 4915871 | 41792.9 |
| polyphosphate kinase | DXC16_22055 | Not Available | Positive | 4916202 - 4916495 | 11117.0 |
| ppx/gppa family phosphatase | DXC16_22060 | Not Available | Positive | 4916488 - 4917396 | 33916.5 |
| methylglyoxal synthase | DXC16_22070 | Not Available | Negative | 4917906 - 4918442 | 20470.6 |
| arginase family protein | DXC16_22075 | Not Available | Negative | 4918497 - 4919306 | 30783.7 |
| alpha-glucan family phosphorylase | DXC16_22080 | Not Available | Negative | 4919323 - 4921881 | 98136.5 |
| sodium:proton antiporter | DXC16_22085 | Not Available | Negative | 4921903 - 4924149 | 82334.0 |
| 6-phosphofructokinase | DXC16_22090 | Not Available | Negative | 4924163 - 4925146 | 35605.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

