Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit s | DXC16_21985 | Not Available | Negative | 4900566 - 4901690 | 42838.9 |
| duf1016 domain-containing protein | DXC16_21990 | Not Available | Negative | 4901692 - 4902735 | 40760.5 |
| restriction endonuclease subunit m | DXC16_21995 | Not Available | Negative | 4902722 - 4904311 | 60987.4 |
| duf2971 domain-containing protein | DXC16_22000 | Not Available | Negative | 4904316 - 4904813 | 19234.2 |
| xre family transcriptional regulator | DXC16_22005 | Not Available | Negative | 4905088 - 4905291 | 7703.41 |
| hypothetical protein | DXC16_22010 | Not Available | Positive | 4905336 - 4905518 | 6885.59 |
| is66 family transposase | DXC16_22015 | Not Available | Positive | 4905646 - 4906156 | 19859.6 |
| aaa family atpase | DXC16_22020 | Not Available | Negative | 4906243 - 4907016 | 29600.2 |
| phosphodiester glycosidase family protein | DXC16_22030 | Not Available | Negative | 4907811 - 4908674 | 31291.2 |
| phosphodiester glycosidase family protein | DXC16_22035 | Not Available | Negative | 4908667 - 4909593 | 33916.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

