Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | DXC16_21935 | Not Available | Positive | 4883632 - 4884930 | 50802.2 |
| integrase | DXC16_21940 | Not Available | Positive | 4884943 - 4886274 | 52160.4 |
| hypothetical protein | DXC16_21945 | Not Available | Positive | 4886349 - 4887491 | 43655.4 |
| dna-binding protein | DXC16_21950 | Not Available | Positive | 4887707 - 4888060 | 13399.3 |
| duf3987 domain-containing protein | DXC16_21955 | Not Available | Positive | 4888063 - 4889469 | 53000.7 |
| hypothetical protein | DXC16_21960 | Not Available | Positive | 4889592 - 4890605 | 38491.9 |
| recombinase | DXC16_21965 | Not Available | Positive | 4890755 - 4892296 | 59008.6 |
| hypothetical protein | DXC16_21970 | Not Available | Negative | 4892372 - 4896643 | 165166.0 |
| type i restriction endonuclease subunit r | DXC16_21975 | Not Available | Negative | 4896680 - 4899907 | 124227.0 |
| hypothetical protein | DXC16_21980 | Not Available | Negative | 4899904 - 4900554 | 25519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

