Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | DXC16_01875 | Not Available | Negative | 412997 - 414643 | 62117.1 |
| carbohydrate-binding protein | DXC16_01880 | Not Available | Negative | 414775 - 417684 | 110202.0 |
| duf1735 domain-containing protein | DXC16_01885 | Not Available | Negative | 417784 - 419136 | 50619.8 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_01890 | Not Available | Negative | 419173 - 421086 | 73437.9 |
| tonb-dependent receptor | DXC16_01895 | Not Available | Negative | 421099 - 424500 | 126159.0 |
| fecr family protein | DXC16_01900 | Not Available | Negative | 424539 - 425255 | 27497.2 |
| rna polymerase sigma-70 factor | DXC16_01905 | Not Available | Positive | 425777 - 426325 | 22036.5 |
| hypothetical protein | DXC16_01910 | Not Available | Negative | 427199 - 428260 | 38868.8 |
| hypothetical protein | DXC16_01920 | Not Available | Negative | 428575 - 428916 | 13584.5 |
| m23 family peptidase | DXC16_01925 | Not Available | Negative | 428888 - 429448 | 20681.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

