Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-trp | Not Available | Not Available | Positive | 4850313 - 4850388 | Not Available |
| integrase | DXC16_21790 | Not Available | Positive | 4850516 - 4851682 | 45943.1 |
| hypothetical protein | DXC16_21795 | Not Available | Negative | 4851723 - 4852217 | 19420.8 |
| hypothetical protein | DXC16_21800 | Not Available | Negative | 4852219 - 4853514 | 50277.4 |
| hypothetical protein | DXC16_21805 | Not Available | Negative | 4853948 - 4856611 | 97440.2 |
| hypothetical protein | DXC16_21810 | Not Available | Negative | 4857027 - 4857848 | 31689.2 |
| udp-galactopyranose mutase | DXC16_21815 | Not Available | Negative | 4857915 - 4859039 | 43612.0 |
| glycosyltransferase wbub | DXC16_21820 | Not Available | Negative | 4859095 - 4860294 | 46255.7 |
| hypothetical protein | DXC16_21825 | Not Available | Negative | 4860309 - 4862117 | 68934.3 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DXC16_21830 | Not Available | Negative | 4862175 - 4863548 | 50894.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

