Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 4836607 - 4836694 | Not Available |
| arac family transcriptional regulator | DXC16_21740 | Not Available | Positive | 4836827 - 4838578 | 68523.8 |
| thiol:disulfide interchange protein | DXC16_21745 | Not Available | Positive | 4838711 - 4840744 | 74765.9 |
| serine dehydratase subunit alpha family protein | DXC16_21750 | Not Available | Positive | 4840936 - 4842231 | 46076.9 |
| n-acetyltransferase | DXC16_21755 | Not Available | Negative | 4842306 - 4842584 | 10514.7 |
| helix-turn-helix domain-containing protein | DXC16_21760 | Not Available | Negative | 4842732 - 4846691 | 149531.0 |
| atp-binding protein | DXC16_21765 | Not Available | Positive | 4846824 - 4847471 | 24812.1 |
| alanine:cation symporter family protein | DXC16_21770 | Not Available | Positive | 4847477 - 4848877 | 51072.4 |
| hypothetical protein | DXC16_21775 | Not Available | Positive | 4849011 - 4849637 | 24320.1 |
| uracil-dna glycosylase family protein | DXC16_21780 | Not Available | Positive | 4849652 - 4850245 | 23030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

