Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tran | DXC16_21685 | Not Available | Positive | 4828909 - 4830033 | 43023.2 |
| m23 family peptidase | DXC16_21690 | Not Available | Positive | 4830044 - 4830595 | 20640.0 |
| hth domain-containing protein | DXC16_21695 | Not Available | Positive | 4830592 - 4830822 | 9115.21 |
| hypothetical protein | DXC16_21700 | Not Available | Positive | 4830896 - 4831495 | 21420.8 |
| mobilization protein | DXC16_21705 | Not Available | Positive | 4831496 - 4832359 | 33633.7 |
| radical sam mobile pair protein b | DXC16_21710 | Not Available | Negative | 4832506 - 4833381 | 33883.9 |
| radical sam mobile pair protein a | DXC16_21715 | Not Available | Negative | 4833378 - 4834046 | 26048.5 |
| cupin domain-containing protein | DXC16_21720 | Not Available | Negative | 4834070 - 4834534 | 16922.2 |
| mbl fold metallo-hydrolase | DXC16_21725 | Not Available | Negative | 4834568 - 4835347 | 28812.0 |
| arac family transcriptional regulator | DXC16_21730 | Not Available | Positive | 4835484 - 4836383 | 35843.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

