Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2786 domain-containing protein | DXC16_21580 | Not Available | Positive | 4808488 - 4809237 | 28733.7 |
| duf3127 domain-containing protein | DXC16_21585 | Not Available | Positive | 4809366 - 4809671 | 11675.9 |
| duf3575 domain-containing protein | DXC16_21590 | Not Available | Positive | 4809668 - 4810207 | 20701.2 |
| hypothetical protein | DXC16_21595 | Not Available | Positive | 4810208 - 4812292 | 80682.1 |
| hypothetical protein | DXC16_21600 | Not Available | Positive | 4812285 - 4813163 | 31891.7 |
| fimbrillin family protein | DXC16_21605 | Not Available | Positive | 4813200 - 4814114 | 32606.6 |
| hypothetical protein | DXC16_21610 | Not Available | Positive | 4814196 - 4817210 | 103980.0 |
| hypothetical protein | DXC16_21615 | Not Available | Positive | 4817222 - 4818025 | 28728.8 |
| hypothetical protein | DXC16_21620 | Not Available | Positive | 4818022 - 4818330 | 10903.7 |
| hypothetical protein | DXC16_21625 | Not Available | Positive | 4818231 - 4818668 | 16977.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

