Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DXC16_21480 | Not Available | Positive | 4794887 - 4795771 | 34283.2 |
| duf4250 domain-containing protein | DXC16_21485 | Not Available | Negative | 4795834 - 4796010 | 6921.42 |
| dead/deah box helicase | DXC16_21490 | Not Available | Negative | 4796125 - 4798404 | 86482.3 |
| hypothetical protein | DXC16_21495 | Not Available | Negative | 4798460 - 4798927 | 16988.2 |
| virulence protein e | DXC16_21500 | Not Available | Positive | 4799113 - 4799682 | 21603.9 |
| duf3987 domain-containing protein | DXC16_21505 | Not Available | Positive | 4799686 - 4801629 | 71616.3 |
| duf4248 domain-containing protein | DXC16_21510 | Not Available | Positive | 4801647 - 4801871 | 8370.25 |
| dna-binding protein | DXC16_21515 | Not Available | Positive | 4802154 - 4802693 | 19200.7 |
| n-acetylmuramoyl-l-alanine amidase | DXC16_21520 | Not Available | Positive | 4803004 - 4803522 | 19703.7 |
| hypothetical protein | DXC16_21525 | Not Available | Positive | 4803897 - 4804271 | 14698.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

